COVID-19 variant spreading in New York City has mutation that may weaken effect of vaccines

BREAKING NEWS: New COVID-19 variant is spreading through New York City – and it has a mutation that may weaken effectiveness of vaccines, researchers say

  • B.1.526 variant first appeared in samples collected in New York City in November
  • It now accounts for about 27 percent of viral sequences in databases used by scientists
  • Scientists have identified two versions of the B.1.526 variant, which are lumped together for now
  • One of the B.1.526 variants has the E484K mutation which scientists believe help the virus partially avoid the vaccine effects
  • The other has the S477N mutation which may optimize the binding process with human cells to possibly increase infection rates

A new COVID-19 variant spreading through New York City has mutations that may weaken the effectiveness of vaccines, according to two new studies.

The B.1.526 variant, which first appeared in samples collected in New York City in November, now makes up about 27 percent of viral sequences deposited into a database shared by scientists called GISAID, according to The New York Times.

One of the studies was led by a group at California Institute of Technology and published online on Tuesday. The other cited by the Times was conducted by researchers at Columbia University but has not yet been made public.

Neither study has been peer reviewed or published in a scientific journal, the outlet noted, but experts not involved with either study called the results worrying.

A new COVID-19 variant spreading through New York City has mutations that may weaken the effectiveness of vaccines, according to two new studies

One of the B.1.526 variants has the E484K mutation, which has independently popped up worldwide and which scientists believe help the virus partially avoid the vaccine effects, according to Caltech researchers.  

The other has the S477N mutation which may act like a guide for COVID-19 to human cells, optimizing the binding process and possibly increasing infection rates.

The Caltech researchers discovered B.1.526’s rise by scanning GISAID for mutations in hundreds of thousands of viral genetic sequences. 

‘There was a pattern that was recurring, and a group of isolates concentrated in the New York region that I hadn’t seen,’ Anthony West, a computational biologist at Caltech. told the Times.

Columbia University researchers identified the variant with a different method: by analyzing the genetic sequences of 1,142 samples from patients at their medical center.

In their study, researchers identified that 12 percent of the patients had been infected with the variant containing the E484K mutation. 

Dr. David Ho, director of the Aaron Diamond AIDS Research Center, said cases carrying the mutation were dispersed throughout the metropolitan area – but most were in nearby Manhattan neighborhoods like Washington Heights and Inwood.

‘We see cases in Westchester, in the Bronx and Queens, the lower part of Manhattan and in Brooklyn,’ Dr. Ho said. 

‘So it seems to be widespread. It’s not a single outbreak.’ 

Ho’s team also found six cases of the Britain’s B.1.1.7 variant – as well as two infections with Brazil’s P1 and one with South Africa’s B.1.351 variant, both of which had not previously been reported in New York City.

Kristian Andersen, a virologist at the Scripps Research Institute in San Diego, was not involved in the new research efforts but called the B.1.526 variant ‘one to watch.’

‘Given the involvement of E484K or S477N, combined with the fact that the New York region has a lot of standing immunity from the spring wave, this is definitely one to watch,’ Andersen told the Times.